PhytophthoraV1, Main, Exploration, bibRecord, 000C43

Expression of resistance gene analogs in woodland strawberry (Fragaria vesca) during infection with Phytophthora cactorum.

Identifieur interne : 000C43 ( Main/Exploration ); précédent : 000C42; suivant : 000C44

Expression of resistance gene analogs in woodland strawberry (Fragaria vesca) during infection with Phytophthora cactorum.

Auteurs : Xiao-Ren Chen [Norvège, République populaire de Chine] ; May Bente Brurberg [Norvège] ; Abdelhameed Elameen [Norvège] ; Sonja Sletner Klemsdal [Norvège] ; Inger Martinussen [Norvège]

Source :

Molecular genetics and genomics : MGG [ 1617-4623 ] ; 2016.

RBID : pubmed:27447867

Descripteurs français

KwdFr :
- Analyse de profil d'expression de gènes (méthodes), Analyse de séquence d'ADN (MeSH), Clonage moléculaire (MeSH), Fragaria (génétique), Fragaria (parasitologie), Maladies des plantes (génétique), Maladies des plantes (parasitologie), Phytophthora (pathogénicité), Protéines végétales (génétique), Régulation de l'expression des gènes végétaux (MeSH), Résistance à la maladie (MeSH).
MESH :
- génétique : Fragaria, Maladies des plantes, Protéines végétales.
- méthodes : Analyse de profil d'expression de gènes.
- parasitologie : Fragaria, Maladies des plantes.
- pathogénicité : Phytophthora.
- Analyse de séquence d'ADN, Clonage moléculaire, Régulation de l'expression des gènes végétaux, Résistance à la maladie.

English descriptors

KwdEn :
- Cloning, Molecular (MeSH), Disease Resistance (MeSH), Fragaria (genetics), Fragaria (parasitology), Gene Expression Profiling (methods), Gene Expression Regulation, Plant (MeSH), Phytophthora (pathogenicity), Plant Diseases (genetics), Plant Diseases (parasitology), Plant Proteins (genetics), Sequence Analysis, DNA (MeSH).
MESH :
- chemical , genetics : Plant Proteins.
- genetics : Fragaria, Plant Diseases.
- methods : Gene Expression Profiling.
- parasitology : Fragaria, Plant Diseases.
- pathogenicity : Phytophthora.
- Cloning, Molecular, Disease Resistance, Gene Expression Regulation, Plant, Sequence Analysis, DNA.

Abstract

Important losses in strawberry production are often caused by the oomycete Phytophthora cactorum, the causal agent of crown rot. However, very limited studies at molecular levels exist of the mechanisms related to strawberry resistance against this pathogen. To begin to rectify this situation, a PCR-based approach (NBS profiling) was used to isolate strawberry resistance gene analogs (RGAs) with altered expression in response to P. cactorum during a time course (2, 4, 6, 24, 48, 96 and 192 h post-infection). Twenty-three distinct RGA fragments of the NB-LRR type were identified from a resistance genotype (Bukammen) of the wild species Fragaria vesca. The gene transcriptional profiles after infection showed that the response of most RGAs was quicker and stronger in the resistance genotype (Bukammen) than in the susceptible one (FDP821) during the early infection stage. The transcriptional patterns of one RGA (RGA109) were further monitored and compared during the P. cactorum infection of two pairs of resistant and susceptible genotype combinations (Bukammen/FDP821 and FDR1218/1603). The 5' end sequence was cloned, and its putative protein was characteristic of NBS-LRR R protein. Our results yielded a first insight into the strawberry RGAs responding to P. cactorum infection at molecular level.

DOI: 10.1007/s00438-016-1232-x
PubMed: 27447867
PubMed Central: PMC4990625

Affiliations:

Norvège, République populaire de Chine

Links toward previous steps (curation, corpus...)

to stream Main, to step Corpus: 000B45
to stream Main, to step Curation: 000B45

Le document en format XML

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<term>Gene Expression Profiling (methods)</term>
<term>Gene Expression Regulation, Plant (MeSH)</term>
<term>Phytophthora (pathogenicity)</term>
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<term>Plant Diseases (parasitology)</term>
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<term>Fragaria (parasitologie)</term>
<term>Maladies des plantes (génétique)</term>
<term>Maladies des plantes (parasitologie)</term>
<term>Phytophthora (pathogénicité)</term>
<term>Protéines végétales (génétique)</term>
<term>Régulation de l'expression des gènes végétaux (MeSH)</term>
<term>Résistance à la maladie (MeSH)</term>
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<front><div type="abstract" xml:lang="en">Important losses in strawberry production are often caused by the oomycete Phytophthora cactorum, the causal agent of crown rot. However, very limited studies at molecular levels exist of the mechanisms related to strawberry resistance against this pathogen. To begin to rectify this situation, a PCR-based approach (NBS profiling) was used to isolate strawberry resistance gene analogs (RGAs) with altered expression in response to P. cactorum during a time course (2, 4, 6, 24, 48, 96 and 192 h post-infection). Twenty-three distinct RGA fragments of the NB-LRR type were identified from a resistance genotype (Bukammen) of the wild species Fragaria vesca. The gene transcriptional profiles after infection showed that the response of most RGAs was quicker and stronger in the resistance genotype (Bukammen) than in the susceptible one (FDP821) during the early infection stage. The transcriptional patterns of one RGA (RGA109) were further monitored and compared during the P. cactorum infection of two pairs of resistant and susceptible genotype combinations (Bukammen/FDP821 and FDR1218/1603). The 5' end sequence was cloned, and its putative protein was characteristic of NBS-LRR R protein. Our results yielded a first insight into the strawberry RGAs responding to P. cactorum infection at molecular level. </div>
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<Abstract><AbstractText>Important losses in strawberry production are often caused by the oomycete Phytophthora cactorum, the causal agent of crown rot. However, very limited studies at molecular levels exist of the mechanisms related to strawberry resistance against this pathogen. To begin to rectify this situation, a PCR-based approach (NBS profiling) was used to isolate strawberry resistance gene analogs (RGAs) with altered expression in response to P. cactorum during a time course (2, 4, 6, 24, 48, 96 and 192 h post-infection). Twenty-three distinct RGA fragments of the NB-LRR type were identified from a resistance genotype (Bukammen) of the wild species Fragaria vesca. The gene transcriptional profiles after infection showed that the response of most RGAs was quicker and stronger in the resistance genotype (Bukammen) than in the susceptible one (FDP821) during the early infection stage. The transcriptional patterns of one RGA (RGA109) were further monitored and compared during the P. cactorum infection of two pairs of resistant and susceptible genotype combinations (Bukammen/FDP821 and FDR1218/1603). The 5' end sequence was cloned, and its putative protein was characteristic of NBS-LRR R protein. Our results yielded a first insight into the strawberry RGAs responding to P. cactorum infection at molecular level. </AbstractText>
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<ForeName>Xiao-Ren</ForeName>
<Initials>XR</Initials>
<AffiliationInfo><Affiliation>Norwegian Institute of Bioeconomy Research, Box 115, 1431, Ås, Norway.</Affiliation>
</AffiliationInfo>
<AffiliationInfo><Affiliation>College of Horticulture and Plant Protection, Yangzhou University, Wenhui Eastern Road 48, Yangzhou, 225009, Jiangsu Province, China.</Affiliation>
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Expression of resistance gene analogs in woodland strawberry (Fragaria vesca) during infection with Phytophthora cactorum.

Expression of resistance gene analogs in woodland strawberry (Fragaria vesca) during infection with Phytophthora cactorum.

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